adjusting the project for windows application

[deepsead1ver]

I am working with several students at the University of Tennessee to use your design in our project. We are creating an Xbox One Kinect 3D scanner for an Embedded Systems class project. Is it possible to edit the arduino sketch to take inputs from a C# GUI running on a windows laptop? Our theory is to still utilize the aux cord method of control for your spin table, but integrate it with a sensor mount that pans and tilts the sensor. So basically just use the turntable, but not the app if possible. If someone from this project has time to discuss possible modifications we would greatly appreciate it.